PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20798
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 1401aa    MW: 151728 Da    PI: 9.2353
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20798genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.4e-08619663244
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 
                      ++WT++Ed  l  +v++ G g+W  I r+ +   +Rt  q+  rw
         EMT20798 619 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 663
                      68*******************************99**99999999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF533351.41E-1041310IPR029063S-adenosyl-L-methionine-dependent methyltransferase
Gene3DG3DSA:3.40.50.1502.1E-731113IPR029063S-adenosyl-L-methionine-dependent methyltransferase
PfamPF034922.1E-1151310IPR005299SAM dependent carboxyl methyltransferase
Gene3DG3DSA:3.40.50.1502.1E-73146174IPR029063S-adenosyl-L-methionine-dependent methyltransferase
Gene3DG3DSA:3.40.50.1502.1E-73213261IPR029063S-adenosyl-L-methionine-dependent methyltransferase
Gene3DG3DSA:1.10.10.601.6E-10612670IPR009057Homeodomain-like
PROSITE profilePS5129415.508613671IPR017930Myb domain
SuperFamilySSF466895.1E-11616669IPR009057Homeodomain-like
SMARTSM007178.7E-7617669IPR001005SANT/Myb domain
PfamPF002492.0E-6619663IPR001005SANT/Myb domain
CDDcd116602.94E-12624668No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0032259Biological Processmethylation
GO:0003677Molecular FunctionDNA binding
GO:0008168Molecular Functionmethyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 1401 aa     Download sequence    Send to blast
MTIVDLGCSS GGNTLLFVSN VIEAVSHHLE KIGGHPAELQ FFLNDLPSND FNRVFRSVQR  60
FKNSIGMGRH KGEEIPAFFI TGLPSSYYTR LLPRSSVHLF HSSYCLHWRS RLPDGLEGKK  120
RPYLNEGNID IAMTTPPSVV KMYQEQFQKD MLLFLRLRYE ELFAGGQMML TFLGRKHGDA  180
YNGGLCRLHG LLSRSVQSLV DEGLVEKEKL DSFNLPLYGP SMEEVKAVVE QSQQFRMNHI  240
KLFETNWDPY DDSEGNDVHD SVQSGINVSK SLRAVMEPLF ASHFGESVLD KLFKKFAYNV  300
EVHLEMEKTK APDKRNCTLD EARTDDIPQV MTKKNDIQME HDKAPCPDDF HTEFYPNFWD  360
VIKTDLMELF KFLHVGQLNL SRLNFEEIVL FTKNKEEDDR IQTYRPIRLL NVSFKIFIEV  420
TINRLNVVFN HVVRPSQTTF MQRRDILDGI GDESDLECEI EPSPKPSNEA AAEASRFAKG  480
FVSIPFRASI ILYIHAYVLI KTHPTNGYIA PNDQNNSILY LVENFKGCHI PNYLITMILM  540
YGPSREQGSS HRANSDVPLL NTPNEKIPRV SSDKQLAQSH RLTNGTGPVS NSKQAPHTGL  600
SPDSFDGNGP HNKKTKKTKA WTKDEDAELM AGVHKCGEGN WLDILRKYNF DSTRTYGQLS  660
QRWAVISKRQ ATTKPAKAKP VTGGYDMKAT QKAFFMALDM PMGKPGGLST LRSGASQQST  720
QHPAPVFGAA APELKSATSS SSFSLPVPVV PSAAPGPVSA QVQVQPRVQQ APSQAAPSKV  780
SNASIKSRNS SKKQTAQANL TNAPSSIQAA AIAAGGRIAT ASIATNLLKA AQSPQAVHIR  840
SRGKGSSKTS TSSKASTVAG EPGTQTGSAQ HSELPNSSAP IPSPTVLITQ STEQVNVVPE  900
VAGVNPPEQS ASAHLLEPDR ALSTTPVPGP CDNMEIDDDS TFCVVTMEDL FPEDVKQPET  960
VSQPETVRLP EMVRQPETVR QTETVSQPET VRQPEMVRQP ETVRQPEMVK QPEMVDPKAE  1020
EMIDPKDADM LEFDRFVAQG CLTTDYSDKS KGVKIAPGAQ GATASQKKKQ LPTVGKSIPV  1080
FRAPVTMKKT KALPSHGATL ASTVASSGLV GTGNAGVLSK AIYRKPAGPG TTGKQNRCQE  1140
IMAQKQHAMN SNSSAMARNA APGTGTPARN VAAGVGAPAR NMAPATGTPA KIRNTAPATG  1200
TPPVRNTAPG TGTPPVRNTA PGTGAPPVRN TAPGTGTPAV RNTAPGTGTP ARNSLTGTGT  1260
PPARNLLTST GTPPARNAAP VTGAPPARNL LTGTGTPPAI RQHNPAPGRD HQVRCRATCP  1320
ESVDSLSPLR VAFNLVWSWL ACPWTAAAGM GSAVERVAPL EDMDGDQGAI CLRPCGRANN  1380
KAYKPGQQLR NNCGLEQSIK A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1m6e_X3e-67131053346S-adenosyl-L-methionine:salicylic acid carbox
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3708180.0AK370818.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2117I01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003572605.10.0PREDICTED: uncharacterized protein LOC100823787
TrEMBLM8BGF90.0M8BGF9_AEGTA; Benzoate carboxyl methyltransferase
STRINGMLOC_66753.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46843754
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.19e-11MYB_related family protein